Datasets |

Breast Mammography Dataset (Lebanon & international cohorts)

Wed, 01 Jan 2025 00:00:00 +0000

Partner: Dr. Charbel Mourad. Basis of our MICCAI 2025 study on bias and generalisability of foundation models across mammography datasets.

Conjunctival Melanocytic Intraepithelial Lesion (CMIL) Histopathology Dataset

Wed, 01 Jan 2025 00:00:00 +0000

Curated with Prof. Martina C. Herwig-Carl (Ophthalmic Pathology, UKB) together with University Hospitals Tübingen and Erlangen.

Fetal Ultrasound Dataset for Congenital Diaphragmatic Hernia

Wed, 01 Jan 2025 00:00:00 +0000

Partner: PD Dr. Florian Recker, Center for Obstetrics and Gynecology, University Hospital Bonn.

FLamby — Federated Learning Benchmark for Healthcare

Wed, 01 Jan 2025 00:00:00 +0000

International collaboration led by Owkin (Jean Ogier du Terrail) with EPFL, Inria, IP Paris, USC and UC Berkeley. Our lab contributed dataset preparation, benchmark design and federated evaluation.

Giant Cell Arteritis Ultrasound Dataset

Wed, 01 Jan 2025 00:00:00 +0000

Curated with the Center for Rare Rheumatological Diseases (Claus-Jürgen Bauer, Prof. Valentin Schäfer), University Hospital Bonn. One of the largest clinically validated datasets for ultrasound-based GCA diagnosis; being extended towards a multi-center German cohort.

Our lab led the ML-readiness: quality control, cleaning, standardised preprocessing, annotation workflow and training/validation splits.

LYSTO — Lymphocyte Assessment Hackathon Benchmark

Wed, 01 Jan 2025 00:00:00 +0000

International initiative with Francesco Ciompi (Radboudumc).

MR-Linac Adaptive Radiotherapy MRI Dataset

Wed, 01 Jan 2025 00:00:00 +0000

Partners: Prof. Guillaume Landry, Dr. Christopher Kurz (LMU University Hospital) and Prof. Nassir Navab (TUM), with University Hospital Düsseldorf, Heidelberg, Zurich and Gemelli Rome. Basis of CloverNet and ProSona.

Musculoskeletal Photon-Counting CT Dataset

Wed, 01 Jan 2025 00:00:00 +0000

Acquired at the Department of Radiology, UKB, on photon-counting CT. Used together with labelled CT data from NAIST to study domain shift and federated learning feasibility.

Neonatal Ultra-Low-Field / High-Field MRI Dataset

Wed, 01 Jan 2025 00:00:00 +0000

Curated with the Department of Experimental Neonatology, University Hospital Bonn. Basis of MRIQT, a physics-aware 3D diffusion model for image-quality transfer; expert clinicians rated 85% of generated images as diagnostically useful.

Pancreatic Ductal Adenocarcinoma Multi-Center CT Dataset

Wed, 01 Jan 2025 00:00:00 +0000

Partners: Patrick Kupczyk (Radiology) and Alexander Semaan (Surgery), University Hospital Bonn, with Charité – Universitätsmedizin Berlin and UMG Göttingen. Harmonised across sites with a federated evaluation setup, so that data never leave the hospitals.

Prostate MRI Dataset with MR Fingerprinting

Wed, 01 Jan 2025 00:00:00 +0000

Curated with Dr. Barbara Wichtmann and Prof. Julian Luetkens (Radiology, UKB); extended with an external cohort from the Peter MacCallum Cancer Centre, Melbourne, and public data (PI-CAI).

Retinal Fundus Image Dataset

Wed, 01 Jan 2025 00:00:00 +0000

International collaboration with Dr. Said El Shamieh (Beirut Arab University, Lebanon). Harmonisation, label mapping and bias/generalisation evaluation protocols led by our lab.