Preprint

FedNorm: Modality-Based Normalization in Federated Learning for Multi-Modal Liver Segmentation

Tobias Bernecker, Annette Peters, Christopher L Schlett, Fabian Bamberg, Fabian Theis, Daniel Rueckert, Jakob Weiß, Shadi Albarqouni

arXiv (Cornell University), 2022

Abstract

Given the high incidence and effective treatment options for liver diseases, they are of great socioeconomic importance. One of the most common methods for analyzing CT and MRI images for diagnosis and follow-up treatment is liver segmentation. Recent advances in deep learning have demonstrated encouraging results for automatic liver segmentation. Despite this, their success depends primarily on the availability of an annotated database, which is often not available because of privacy concerns. Federated Learning has been recently proposed as a solution to alleviate these challenges by training a shared global model on distributed clients without access to their local databases. Nevertheless, Federated Learning does not perform well when it is trained on a high degree of heterogeneity of image data due to multi-modal imaging, such as CT and MRI, and multiple scanner types. To this end, we propose Fednorm and its extension \fednormp, two Federated Learning algorithms that use a modality-based normalization technique. Specifically, Fednorm normalizes the features on a client-level, while Fednorm+ employs the modality information of single slices in the feature normalization. Our methods were validated using 428 patients from six publicly available databases and compared to state-of-the-art Federated Learning algorithms and baseline models in heterogeneous settings (multi-institutional, multi-modal data). The experimental results demonstrate that our methods show an overall acceptable performance, achieve Dice per patient scores up to 0.961, consistently outperform locally trained models, and are on par or slightly better than centralized models.

Interactive explainer

Coming soon. An interactive Slidev walkthrough of this paper — with live, explorable figures — will appear here. Authors: set slidev: in this page's front matter to the deployed deck URL.

Research themes

Lab authors

Cite (BibTeX)
@article{bernecker2022fednorm,
 author = {Bernecker, Tobias and Peters, Annette and Schlett, Christopher L and Bamberg, Fabian and Theis, Fabian and Rueckert, Daniel and Weiß, Jakob and Albarqouni, Shadi},
 journal = {arXiv preprint arXiv:2205.11096},
 title = {FedNorm: Modality-Based Normalization in Federated Learning for Multi-Modal Liver Segmentation},
 year = {2022}
}