Journal Q1IF 12.4

Multi-task multi-domain learning for digital staining and classification of leukocytes

Agnieszka Tomczak, Slobodan Ilic, Gaby Marquardt, Thomas Engel, Frank Forster, Nassir Navab, Shadi Albarqouni

IEEE Transactions on Medical Imaging, December 2020

Teaser figure

Abstract

oking stained images preserving the inter-cellular structures, crucial for the medical experts to perform classification. We achieve better structure preservation by adding auxiliary tasks of segmentation and direct reconstruction. Segmentation enforces that the network learns to generate correct nucleus and cytoplasm shape, while direct reconstruction enforces reliable translation between the matching images across domains. Besides, we build a robust domain agnostic latent space by injecting the target domain label directly to the generator, i.e., bypassing the encoder. It allows the encoder to extract features independently of the target domain and enables an automated domain invariant classification of the white blood cells. We validated our method on a large dataset composed of leukocytes of 24 patients, achieving state-of-the-art performance on both digital staining and classification tasks.

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Research themes

Keywords

HistologyDomain AdaptationMedical Imaging

Lab authors

Cite (BibTeX)
@article{tomczak2020multi,
 author = {Tomczak, Agnieszka and Ilic, Slobodan and Marquardt, Gaby and Engel, Thomas and Forster, Frank and Navab, Nassir and Albarqouni, Shadi},
 journal = {IEEE Transactions on Medical Imaging},
 pages = {1--1},
 publisher = {10.1109/TMI.2020.3046334},
 title = {Multi-task multi-domain learning for digital staining and classification of leukocytes},
 year = {2020}
}

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