Histology

Seamless Virtual Whole Slide Image Synthesis and Validation Using Perceptual Embedding Consistency

Stain virtualization is an application with growing interest in digital pathology allowing simulation of stained tissue images thus saving lab and tissue resources. Thanks to the …

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Amal Lahiani
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Multi-task multi-domain learning for digital staining and classification of leukocytes

oking stained images preserving the inter-cellular structures, crucial for the medical experts to perform classification. We achieve better structure preservation by adding …

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Agnieszka Tomczak
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Virtualization of tissue staining in digital pathology using an unsupervised deep learning approach featured image

Virtualization of tissue staining in digital pathology using an unsupervised deep learning approach

Histopathological evaluation of tissue samples is a key practice in patient diagnosis and drug development, especially in oncology. Historically, Hematoxylin and Eosin (H&E) has …

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Amal Lahiani
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Staingan: Stain style transfer for digital histological images featured image

Staingan: Stain style transfer for digital histological images

Digitized Histological diagnosis is in increasing demand. However, color variations due to various factors are imposing obstacles to the diagnosis process. The problem of stain …

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M. Tarek Shaban
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Perceptual Embedding Consistency for Seamless Reconstruction of Tilewise Style Transfer featured image

Perceptual Embedding Consistency for Seamless Reconstruction of Tilewise Style Transfer

Style transfer is a field with growing interest and use cases in deep learning. Recent work has shown Generative Adversarial Networks(GANs) can be used to create realistic images …

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Amal Lahiani
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Generalizing multistain immunohistochemistry tissue segmentation using one-shot color deconvolution deep neural networks featured image

Generalizing multistain immunohistochemistry tissue segmentation using one-shot color deconvolution deep neural networks

A key challenge in cancer immunotherapy biomarker research is quantification of pattern changes in microscopic whole slide images of tumour biopsies. Drug development requires a …

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Amal Lahiani
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Invited Talk: Can Deep Learning Models be Trained with Annotations Collected via Crowdsourcing? featured image

Invited Talk: Can Deep Learning Models be Trained with Annotations Collected via Crowdsourcing?

One of the major challenges facing researchers nowadays in applying deep learning (DL) models to Medical Image Analysis is the limited amount of annotated data. Collecting such …

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Shadi Albarqouni
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Diagnostic assessment of deep learning algorithms for detection of lymph node metastases in women with breast cancer

Importance: Application of deep learning algorithms to whole-slide pathology images can potentially improve diagnostic accuracy and efficiency. Objective: Assess the performance of …

babak-ehteshami-bejnordi
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Structure-preserving color normalization and sparse stain separation for histological images

Staining and scanning of tissue samples for microscopic examination is fraught with undesirable color variations arising from differences in raw materials and manufacturing …

abhishek-vahadane
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Aggnet: deep learning from crowds for mitosis detection in breast cancer histology images

The lack of publicly available ground-truth data has been identified as the major challenge for transferring recent developments in deep learning to the biomedical imaging domain. …

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Shadi Albarqouni
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